Estuary-dependency and multiple habitat connectivity of juvenile leervis lichia amia (pisces: carangidae) and the factors influencing their movements
- Authors: Murray, Taryn Sara
- Date: 2017
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/4477 , vital:20676
- Description: Estuaries are highly productive ecosystems that provide an important nursery function to many marine-spawning fish species. While in estuaries, the juveniles of estuary-associated fishes are exposed to frequent, abrupt changes in environmental conditions and, as such, utilise movement as a strategy to cope with the changing conditions. Therefore, to gain a better understanding of the importance of estuaries (i.e. estuary-dependency) to estuary-associated species, knowledge on their movement patterns within estuaries, the links between habitats, and the environmental and cyclical processes driving these movements, is necessary. Lichia amia, commonly known as leervis or garrick in southern Africa, is an over-exploited, estuary-dependent fishery species targeted by coastal recreational and subsistence fishers, as well as spearfishers, throughout its South African distribution. Aspects of its biology and life history have been assessed; however, knowledge on its movement behaviour is limited to a single conventional dart tagging study, which described large-scale coastal movements of juvenile, sub-adult and adult leervis. As such, little is known about area use and movement patterns within estuaries, or the degree of connectivity between estuarine and marine habitats. Therefore, the aim of this study, using conventional dart tagging and passive acoustic telemetry methods, was to assess the role of estuarine nursery habitats in the life cycle of the leervis by examining area use patterns and movement behaviour within estuaries, investigating the degree of habitat connectivity, and determining the drivers (cyclical rhythms and environmental variables) of estuarine use and connectivity. A dedicated conventional mark-recapture study on juvenile leervis within the Swartkops Estuary revealed a high level of estuarine fidelity (philopatry) suggesting that estuaries are important nursery habitats. However, movement distances increased with increasing fish length, with some fish also being recaptured in the neighbouring marine environment. These results provided evidence of an ontogenetic habitat shift, with smaller fish remaining in the estuary for extended periods and larger individuals undertaking more extensive movements. Complementary passive acoustic telemetry studies were conducted in the Kowie and Goukou estuaries, spaced 620 km apart, to assess area use, movement patterns, residency and multiple habitat connectivity of juvenile leervis. These telemetry studies showed varying levels of residency within the tagging estuaries, and seasonal variation in area use. The lengths of estuary used by leervis tagged in the Kowie Estuary generally decreased with the onset of austral winter, while fish tagged in the Goukou Estuary generally moved into the marine environment. Despite tagged individuals spending on average 56% and 38% of the total monitoring periods within the Kowie and Goukou estuaries, respectively, fish displayed high levels of multiple habitat connectivity, with 71% and 76% of Kowie and Goukou fish, respectively, visiting adjacent marine and estuarine environments. A total of 11 different neighbouring habitats (estuaries and ports) were visited by Kowie fish, while fish tagged in the Goukou Estuary only visited four adjacent habitats. These differences in connectivity could be attributed to the proximity of many more estuaries to the Kowie Estuary compared to the Goukou Estuary. Estuarine movements by acoustically tagged leervis in both estuaries followed a strong diel but a much weaker tidal pattern. A number of environmental variables significantly influenced estuarine movements and marine excursions (including river inflow, photoperiod and moon phase). However, water temperature (river and sea) had the most significant effects on these movements, with decreasing winter river temperatures coincident with a downstream shift in mean daily position of fish tagged in the Kowie Estuary, and movement into the marine environment from the Goukou Estuary. Interestingly, the area use patterns of juvenile leervis tagged in the Kowie and Goukou estuaries were different, predominantly using limited portions of each estuary. Kowie fish spent more time in the mouth region and lower reaches, while Goukou fish spent more time in the lower and middle reaches of the estuary. Therefore, should no-take Estuarine Protected Areas be implemented, inter-estuary differences would need to be considered to determine the most effective stretches of estuary to close to provide maximum protection for leervis. This study provided new information on the movement behaviour of juvenile leervis, the degree to which juveniles depend on estuaries as nursery areas, and the cyclical rhythms and environmental factors influencing their movements. The study therefore contributes considerably to our understanding of the role of estuaries in the life history of leervis, and provides essential information for the improved management of this over-exploited species.
- Full Text:
- Date Issued: 2017
- Authors: Murray, Taryn Sara
- Date: 2017
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/4477 , vital:20676
- Description: Estuaries are highly productive ecosystems that provide an important nursery function to many marine-spawning fish species. While in estuaries, the juveniles of estuary-associated fishes are exposed to frequent, abrupt changes in environmental conditions and, as such, utilise movement as a strategy to cope with the changing conditions. Therefore, to gain a better understanding of the importance of estuaries (i.e. estuary-dependency) to estuary-associated species, knowledge on their movement patterns within estuaries, the links between habitats, and the environmental and cyclical processes driving these movements, is necessary. Lichia amia, commonly known as leervis or garrick in southern Africa, is an over-exploited, estuary-dependent fishery species targeted by coastal recreational and subsistence fishers, as well as spearfishers, throughout its South African distribution. Aspects of its biology and life history have been assessed; however, knowledge on its movement behaviour is limited to a single conventional dart tagging study, which described large-scale coastal movements of juvenile, sub-adult and adult leervis. As such, little is known about area use and movement patterns within estuaries, or the degree of connectivity between estuarine and marine habitats. Therefore, the aim of this study, using conventional dart tagging and passive acoustic telemetry methods, was to assess the role of estuarine nursery habitats in the life cycle of the leervis by examining area use patterns and movement behaviour within estuaries, investigating the degree of habitat connectivity, and determining the drivers (cyclical rhythms and environmental variables) of estuarine use and connectivity. A dedicated conventional mark-recapture study on juvenile leervis within the Swartkops Estuary revealed a high level of estuarine fidelity (philopatry) suggesting that estuaries are important nursery habitats. However, movement distances increased with increasing fish length, with some fish also being recaptured in the neighbouring marine environment. These results provided evidence of an ontogenetic habitat shift, with smaller fish remaining in the estuary for extended periods and larger individuals undertaking more extensive movements. Complementary passive acoustic telemetry studies were conducted in the Kowie and Goukou estuaries, spaced 620 km apart, to assess area use, movement patterns, residency and multiple habitat connectivity of juvenile leervis. These telemetry studies showed varying levels of residency within the tagging estuaries, and seasonal variation in area use. The lengths of estuary used by leervis tagged in the Kowie Estuary generally decreased with the onset of austral winter, while fish tagged in the Goukou Estuary generally moved into the marine environment. Despite tagged individuals spending on average 56% and 38% of the total monitoring periods within the Kowie and Goukou estuaries, respectively, fish displayed high levels of multiple habitat connectivity, with 71% and 76% of Kowie and Goukou fish, respectively, visiting adjacent marine and estuarine environments. A total of 11 different neighbouring habitats (estuaries and ports) were visited by Kowie fish, while fish tagged in the Goukou Estuary only visited four adjacent habitats. These differences in connectivity could be attributed to the proximity of many more estuaries to the Kowie Estuary compared to the Goukou Estuary. Estuarine movements by acoustically tagged leervis in both estuaries followed a strong diel but a much weaker tidal pattern. A number of environmental variables significantly influenced estuarine movements and marine excursions (including river inflow, photoperiod and moon phase). However, water temperature (river and sea) had the most significant effects on these movements, with decreasing winter river temperatures coincident with a downstream shift in mean daily position of fish tagged in the Kowie Estuary, and movement into the marine environment from the Goukou Estuary. Interestingly, the area use patterns of juvenile leervis tagged in the Kowie and Goukou estuaries were different, predominantly using limited portions of each estuary. Kowie fish spent more time in the mouth region and lower reaches, while Goukou fish spent more time in the lower and middle reaches of the estuary. Therefore, should no-take Estuarine Protected Areas be implemented, inter-estuary differences would need to be considered to determine the most effective stretches of estuary to close to provide maximum protection for leervis. This study provided new information on the movement behaviour of juvenile leervis, the degree to which juveniles depend on estuaries as nursery areas, and the cyclical rhythms and environmental factors influencing their movements. The study therefore contributes considerably to our understanding of the role of estuaries in the life history of leervis, and provides essential information for the improved management of this over-exploited species.
- Full Text:
- Date Issued: 2017
Movement patterns and genetic stock delineation of an endemic South African sparid, the Poenskop, Cymatoceps nasutus (Castelnau, 1861)
- Authors: Murray, Taryn Sara
- Date: 2013
- Subjects: Fish stock assessment -- South Africa , Sparidae -- South Africa , Fishes -- Reproduction -- South Africa , Fishing -- South Africa , Fish populations -- South Africa , Fishes -- Behavior -- South Africa , Marine fishes -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5178 , http://hdl.handle.net/10962/d1001514 , Fish stock assessment -- South Africa , Sparidae -- South Africa , Fishes -- Reproduction -- South Africa , Fishing -- South Africa , Fish populations -- South Africa , Fishes -- Behavior -- South Africa , Marine fishes -- South Africa
- Description: Poenskop Cymatoceps nasutus (Pisces: Sparidae), an endemic South African sparid, is an important angling species being predominantly targeted by the recreational shore and skiboat sector. This species is slow-growing, long-lived, late-maturing and sex-changing, making poenskop acutely sensitive to over-exploitation. Despite interventions, such as the imposition of size and bag limits (currently 50 cm TL and one per licensed fisher per day) by authorities, catch-per-unit-effort trends reflect a severe and consistent stock decline over the last two decades. Poenskop has been identified as a priority species for research and conservation. Although the biology and population dynamics of this species have been well-documented, little is known about the movement behaviour of poenskop. Furthermore, there is a complete lack of information on its genetic stock structure. This thesis aimed to address the current knowledge gaps concerning movement behaviour and genetic stock structure of poenskop, making use of a range of methods and drawing on available information, including available fishery records as well as published and unpublished survey and research data, and data from long-term monitoring programmes. Analysis of available catch data (published and unpublished) revealed a decline in the number of poenskop caught as well as size of fish taken over the last two decades, ultimately reflecting the collapse of the stock (estimated to be at 20% of their pristine level). Improved catch-per-unit-effort data from the Tsitsikamma National Park Marine Protected Area (MPA), and larger poenskop being caught in the no-take areas than adjacent exploited areas of the Pondoland MPA confirmed that MPAs can be effective for the protection and management of poenskop. The current MPA network in South Africa is already wellestablished, and encompasses considerable reef areas, being preferable for poenskop habitation. Conventional dart tagging and recapture information from three ongoing, long-term fishtagging projects, conducted throughout the poenskop’s distribution, indicated high levels of residency at all life-history stages. Coastal region, seasonality and time at recapture did not appear to have a significant effect on the level of movement or distance moved. However, on examining the relationship among coastal movements and fish size and ages, larger and older fish (adults) moved greater distances, with juveniles and sub-adults showing high degrees of residency. An estimation of home-range size indicated smaller poenskop to hold smaller home-ranges, while larger poenskop hold larger home-ranges. Large easterly displacements of a number of adult poenskop is in accordance with previous findings that this species may undertake a unidirectional migration up the coastline of South Africa where they possibly settle in Transkei waters for the remainder of their lives. This high level of residency makes poenskop vulnerable to localised depletion, although they can be effectively protected by suitable MPAs. Despite considerable tagging effort along the South African coastline (2 704 poenskop tagged with 189 recaptures, between 1984 and 2010), there remains limited information on the connectivity of different regions along the South African coastline. This was addressed using mitochondrial DNA sequencing. The mitochondrial DNA control region was used due to its high substitution rate, haploid nature, maternal inheritance and absence of recombination. The mtDNA sequencing showed no evidence of major geographic barriers to gene flow in this species. Samples collected throughout the core distribution of poenskop showed high genetic diversity (h = 0.88, π = 0.01), low genetic differentiation among regions, no spatial structure (ɸST = 0.012, p = 0.208) and no evidence of isolation by distance. The collapsed stock status of poenskop as well as the fact that it is being actively targeted by recreational and commercial fishers suggests that this species requires improved management, with consideration given to its life-history style, residency and poor conservation status. Management recommendations for poenskop, combined with increasing South Africa’s existing MPA network, include the possibility of setting up a closed season (during known spawning periods) as well as the decommercialisation of this species. The techniques used and developed in this study can also be adopted for other overexploited linefish species.
- Full Text:
- Date Issued: 2013
- Authors: Murray, Taryn Sara
- Date: 2013
- Subjects: Fish stock assessment -- South Africa , Sparidae -- South Africa , Fishes -- Reproduction -- South Africa , Fishing -- South Africa , Fish populations -- South Africa , Fishes -- Behavior -- South Africa , Marine fishes -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5178 , http://hdl.handle.net/10962/d1001514 , Fish stock assessment -- South Africa , Sparidae -- South Africa , Fishes -- Reproduction -- South Africa , Fishing -- South Africa , Fish populations -- South Africa , Fishes -- Behavior -- South Africa , Marine fishes -- South Africa
- Description: Poenskop Cymatoceps nasutus (Pisces: Sparidae), an endemic South African sparid, is an important angling species being predominantly targeted by the recreational shore and skiboat sector. This species is slow-growing, long-lived, late-maturing and sex-changing, making poenskop acutely sensitive to over-exploitation. Despite interventions, such as the imposition of size and bag limits (currently 50 cm TL and one per licensed fisher per day) by authorities, catch-per-unit-effort trends reflect a severe and consistent stock decline over the last two decades. Poenskop has been identified as a priority species for research and conservation. Although the biology and population dynamics of this species have been well-documented, little is known about the movement behaviour of poenskop. Furthermore, there is a complete lack of information on its genetic stock structure. This thesis aimed to address the current knowledge gaps concerning movement behaviour and genetic stock structure of poenskop, making use of a range of methods and drawing on available information, including available fishery records as well as published and unpublished survey and research data, and data from long-term monitoring programmes. Analysis of available catch data (published and unpublished) revealed a decline in the number of poenskop caught as well as size of fish taken over the last two decades, ultimately reflecting the collapse of the stock (estimated to be at 20% of their pristine level). Improved catch-per-unit-effort data from the Tsitsikamma National Park Marine Protected Area (MPA), and larger poenskop being caught in the no-take areas than adjacent exploited areas of the Pondoland MPA confirmed that MPAs can be effective for the protection and management of poenskop. The current MPA network in South Africa is already wellestablished, and encompasses considerable reef areas, being preferable for poenskop habitation. Conventional dart tagging and recapture information from three ongoing, long-term fishtagging projects, conducted throughout the poenskop’s distribution, indicated high levels of residency at all life-history stages. Coastal region, seasonality and time at recapture did not appear to have a significant effect on the level of movement or distance moved. However, on examining the relationship among coastal movements and fish size and ages, larger and older fish (adults) moved greater distances, with juveniles and sub-adults showing high degrees of residency. An estimation of home-range size indicated smaller poenskop to hold smaller home-ranges, while larger poenskop hold larger home-ranges. Large easterly displacements of a number of adult poenskop is in accordance with previous findings that this species may undertake a unidirectional migration up the coastline of South Africa where they possibly settle in Transkei waters for the remainder of their lives. This high level of residency makes poenskop vulnerable to localised depletion, although they can be effectively protected by suitable MPAs. Despite considerable tagging effort along the South African coastline (2 704 poenskop tagged with 189 recaptures, between 1984 and 2010), there remains limited information on the connectivity of different regions along the South African coastline. This was addressed using mitochondrial DNA sequencing. The mitochondrial DNA control region was used due to its high substitution rate, haploid nature, maternal inheritance and absence of recombination. The mtDNA sequencing showed no evidence of major geographic barriers to gene flow in this species. Samples collected throughout the core distribution of poenskop showed high genetic diversity (h = 0.88, π = 0.01), low genetic differentiation among regions, no spatial structure (ɸST = 0.012, p = 0.208) and no evidence of isolation by distance. The collapsed stock status of poenskop as well as the fact that it is being actively targeted by recreational and commercial fishers suggests that this species requires improved management, with consideration given to its life-history style, residency and poor conservation status. Management recommendations for poenskop, combined with increasing South Africa’s existing MPA network, include the possibility of setting up a closed season (during known spawning periods) as well as the decommercialisation of this species. The techniques used and developed in this study can also be adopted for other overexploited linefish species.
- Full Text:
- Date Issued: 2013
- «
- ‹
- 1
- ›
- »