Diversification of the African legless skinks in the subfamily Acontinae (Family Scincidae)
- Zhao, Zhongning, Conradie, Werner C, Pietersen, Darren W, Jordaan, Adriaan, Nicolau, Gary K, Edwards, Shelley, Riekert, Stephanus, Heideman, Neil
- Authors: Zhao, Zhongning , Conradie, Werner C , Pietersen, Darren W , Jordaan, Adriaan , Nicolau, Gary K , Edwards, Shelley , Riekert, Stephanus , Heideman, Neil
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461495 , vital:76207 , xlink:href="https://doi.org/10.1016/j.ympev.2023.107747"
- Description: Cladogenic diversification is often explained by referring to climatic oscillations and geomorphic shifts that cause allopatric speciation. In this regard, southern Africa retains a high level of landscape heterogeneity in vegetation, geology, and rainfall patterns. The legless skink subfamily Acontinae occurs broadly across the southern African subcontinent and therefore provides an ideal model group for investigating biogeographic patterns associated with the region. A robust phylogenetic study of the Acontinae with comprehensive coverage and adequate sampling of each taxon has been lacking up until now, resulting in unresolved questions regarding the subfamily’s biogeography and evolution. In this study, we used multi-locus genetic markers (three mitochondrial and two nuclear) with comprehensive taxon coverage (all currently recognized Acontinae species) and adequate sampling (multiple specimens for most taxa) of each taxon to infer a phylogeny for the subfamily.
- Full Text:
- Date Issued: 2023
- Authors: Zhao, Zhongning , Conradie, Werner C , Pietersen, Darren W , Jordaan, Adriaan , Nicolau, Gary K , Edwards, Shelley , Riekert, Stephanus , Heideman, Neil
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461495 , vital:76207 , xlink:href="https://doi.org/10.1016/j.ympev.2023.107747"
- Description: Cladogenic diversification is often explained by referring to climatic oscillations and geomorphic shifts that cause allopatric speciation. In this regard, southern Africa retains a high level of landscape heterogeneity in vegetation, geology, and rainfall patterns. The legless skink subfamily Acontinae occurs broadly across the southern African subcontinent and therefore provides an ideal model group for investigating biogeographic patterns associated with the region. A robust phylogenetic study of the Acontinae with comprehensive coverage and adequate sampling of each taxon has been lacking up until now, resulting in unresolved questions regarding the subfamily’s biogeography and evolution. In this study, we used multi-locus genetic markers (three mitochondrial and two nuclear) with comprehensive taxon coverage (all currently recognized Acontinae species) and adequate sampling (multiple specimens for most taxa) of each taxon to infer a phylogeny for the subfamily.
- Full Text:
- Date Issued: 2023
Systematic revision of Afrogecko ansorgii (Boulenger, 1907)(Sauria: Gekkonidae) from western Angola
- Lobón-Rovira, Javier, Conradie, Werner C, Pinto, Pedro V, Keates, Chad, Edwards, Shelley, du Plessis, Anton, Branch, William R
- Authors: Lobón-Rovira, Javier , Conradie, Werner C , Pinto, Pedro V , Keates, Chad , Edwards, Shelley , du Plessis, Anton , Branch, William R
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461550 , vital:76212 , xlink:href="https://doi.org/10.11646/zootaxa.5124.4.1"
- Description: Here we provide the first phylogenetic analysis that include Afrogecko ansorgii and a detailed morphological comparison with other species of leaf-toed geckos. For this purpose, we used two mitochondrial (16S, ND2) and four nuclear (RAG1, RAG2, CMOS, PDC) genes to produce a robust phylogenetic reconstruction. This allowed us to show that A. ansorgii is not related as previously believed to circum-Indian Ocean leaf-toed geckos and is rather more closely related to other Malagasy leaf-toed geckos. Additionally, we explore and compare osteological variation in A. ansorgii skulls through High Resolution X-ray Computed Tomography with previously published material. This allowed us to describe herein a new genus, Bauerius gen. nov., and additionally provide a detailed redescription of the species (including the first description of male material), supplementing the limited original description and type series, which consisted of only two females.
- Full Text:
- Date Issued: 2022
- Authors: Lobón-Rovira, Javier , Conradie, Werner C , Pinto, Pedro V , Keates, Chad , Edwards, Shelley , du Plessis, Anton , Branch, William R
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461550 , vital:76212 , xlink:href="https://doi.org/10.11646/zootaxa.5124.4.1"
- Description: Here we provide the first phylogenetic analysis that include Afrogecko ansorgii and a detailed morphological comparison with other species of leaf-toed geckos. For this purpose, we used two mitochondrial (16S, ND2) and four nuclear (RAG1, RAG2, CMOS, PDC) genes to produce a robust phylogenetic reconstruction. This allowed us to show that A. ansorgii is not related as previously believed to circum-Indian Ocean leaf-toed geckos and is rather more closely related to other Malagasy leaf-toed geckos. Additionally, we explore and compare osteological variation in A. ansorgii skulls through High Resolution X-ray Computed Tomography with previously published material. This allowed us to describe herein a new genus, Bauerius gen. nov., and additionally provide a detailed redescription of the species (including the first description of male material), supplementing the limited original description and type series, which consisted of only two females.
- Full Text:
- Date Issued: 2022
A new species of red toad, Schismaderma Smith, 1849 (Anura: Bufonidae), from central Angola
- Baptista, Ninda L, Pinto, Pedro V, Keates, Chad, Edwards, Shelley, Rödel, Mark-Oliver, Conradie, Werner C
- Authors: Baptista, Ninda L , Pinto, Pedro V , Keates, Chad , Edwards, Shelley , Rödel, Mark-Oliver , Conradie, Werner C
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461462 , vital:76204 , xlink:href="https://www.biotaxa.org/Zootaxa/article/view/zootaxa.5081.3.1"
- Description: A new species of red toad, from the previously monotypic genus Schismaderma, is described. The new species was found in Malanje Province, and seems endemic to central Angola, occurring approximately 500 km west of the closest known records of Schismaderma carens. Unusual adult colouration and geographical distance to remaining S. carens populations suggested specific differentiation. In an integrative approach, we compared the red toads from central Angola with S. carens from across the entire range, including molecular data, morphology of adults and tadpoles, and male advertisement calls. Phylogenetic analysis based on mitochondrial (12S, 16S, COI) and nuclear (CXCR4, RAG1) markers, retrieved the Angolan clade as monophyletic, and revealed intra-specific substructuring among the remaining Schismaderma. Genetic distances supported specific differentiation of the central Angolan material compared with other S. carens. Adults from the new Angolan species have bolder ventral patterning and smaller body size than S. carens. No obvious differences were detected between the tadpoles and the advertisement calls of the two Schismaderma species. This discovery adds to the knowledge of the herpetofauna of the Angolan Miombo woodlands, a poorly understood ecoregion, and likely more biodiverse than previously assumed. The result of past river basin dynamics in central Angola likely led to the evolution of this new species of Schismaderma.
- Full Text:
- Date Issued: 2021
- Authors: Baptista, Ninda L , Pinto, Pedro V , Keates, Chad , Edwards, Shelley , Rödel, Mark-Oliver , Conradie, Werner C
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461462 , vital:76204 , xlink:href="https://www.biotaxa.org/Zootaxa/article/view/zootaxa.5081.3.1"
- Description: A new species of red toad, from the previously monotypic genus Schismaderma, is described. The new species was found in Malanje Province, and seems endemic to central Angola, occurring approximately 500 km west of the closest known records of Schismaderma carens. Unusual adult colouration and geographical distance to remaining S. carens populations suggested specific differentiation. In an integrative approach, we compared the red toads from central Angola with S. carens from across the entire range, including molecular data, morphology of adults and tadpoles, and male advertisement calls. Phylogenetic analysis based on mitochondrial (12S, 16S, COI) and nuclear (CXCR4, RAG1) markers, retrieved the Angolan clade as monophyletic, and revealed intra-specific substructuring among the remaining Schismaderma. Genetic distances supported specific differentiation of the central Angolan material compared with other S. carens. Adults from the new Angolan species have bolder ventral patterning and smaller body size than S. carens. No obvious differences were detected between the tadpoles and the advertisement calls of the two Schismaderma species. This discovery adds to the knowledge of the herpetofauna of the Angolan Miombo woodlands, a poorly understood ecoregion, and likely more biodiverse than previously assumed. The result of past river basin dynamics in central Angola likely led to the evolution of this new species of Schismaderma.
- Full Text:
- Date Issued: 2021
New insights into the geographical distribution, ecology and conservation status of South Africa’s endemic Coastal Leaf-toed Gecko, Cryptactites peringueyi (Boulenger, 1910)
- Nicolau, Gary K, Petford, Melissa, Edwards, Shelley, Busschau, Theo, Lynch, Kier, Kemp, Luke, Balmer, Jonathan P, Keates, Chad, Hundermark, Courtney R, Weeber, Joshua, Conradie, Werner C
- Authors: Nicolau, Gary K , Petford, Melissa , Edwards, Shelley , Busschau, Theo , Lynch, Kier , Kemp, Luke , Balmer, Jonathan P , Keates, Chad , Hundermark, Courtney R , Weeber, Joshua , Conradie, Werner C
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461517 , vital:76209 , xlink:href="https://www.biotaxa.org/hn/article/view/63908"
- Description: Range-restricted species are generally poorly known and at higher risk of extinction than species with wider distributions. In the past, the Coastal Leaf-toed Gecko, Cryptactites peringueyi (Boulenger, 1910) caused much confusion and was once referred to as “one of the herpetological mysteries of the region”. Knowledge on the species has grown substantially, predominately due to new insights into its ecological preferences. Surveys from 2018 through early 2020 re-established the presence of C. peringueyi at three of four historical localities, as well as documenting four new localities. In 2018, preliminary data from these surveys resulted in an IUCN Red List downgrading from Critically Endangered to Near Threatened. However, with further investigation into the distribution of the species, the results from the present study more than doubled the previously estimated Extent of Occurrence from 785 km2 to 1504 km2 and the populations appear to be stable, despite environmental and anthropogenic disturbance. By incorporating environmental niche modelling, we further discuss the distribution, habits and ecology of C. peringueyi. The results presented here highlight the importance of fully understanding a species’ ecology to address its conservation status and we suggest that a new listing of Least Concern is appropriate for C. peringueyi.
- Full Text:
- Date Issued: 2021
- Authors: Nicolau, Gary K , Petford, Melissa , Edwards, Shelley , Busschau, Theo , Lynch, Kier , Kemp, Luke , Balmer, Jonathan P , Keates, Chad , Hundermark, Courtney R , Weeber, Joshua , Conradie, Werner C
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461517 , vital:76209 , xlink:href="https://www.biotaxa.org/hn/article/view/63908"
- Description: Range-restricted species are generally poorly known and at higher risk of extinction than species with wider distributions. In the past, the Coastal Leaf-toed Gecko, Cryptactites peringueyi (Boulenger, 1910) caused much confusion and was once referred to as “one of the herpetological mysteries of the region”. Knowledge on the species has grown substantially, predominately due to new insights into its ecological preferences. Surveys from 2018 through early 2020 re-established the presence of C. peringueyi at three of four historical localities, as well as documenting four new localities. In 2018, preliminary data from these surveys resulted in an IUCN Red List downgrading from Critically Endangered to Near Threatened. However, with further investigation into the distribution of the species, the results from the present study more than doubled the previously estimated Extent of Occurrence from 785 km2 to 1504 km2 and the populations appear to be stable, despite environmental and anthropogenic disturbance. By incorporating environmental niche modelling, we further discuss the distribution, habits and ecology of C. peringueyi. The results presented here highlight the importance of fully understanding a species’ ecology to address its conservation status and we suggest that a new listing of Least Concern is appropriate for C. peringueyi.
- Full Text:
- Date Issued: 2021
New insights into the taxonomic status, distribution and natural history of De Witte's Clicking Frog (Kassinula wittei Laurent, 1940)
- Conradie, Werner C, Keates, Chad, Lobón-Rovira, Javier, Vaz Pinto, Pedro, Verburgt, Luke, Baptista, Ninda L, Harvey, James, Júlio, Timóteo
- Authors: Conradie, Werner C , Keates, Chad , Lobón-Rovira, Javier , Vaz Pinto, Pedro , Verburgt, Luke , Baptista, Ninda L , Harvey, James , Júlio, Timóteo
- Date: 2020
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443572 , vital:74134 , https://hdl.handle.net/10520/ejc-afzoo-v55-n4-a6
- Description: Kassinula is a monotypic genus of small frog in the family Hyperoliidae, only represented by Kassinula wittei. This species morphologically resembles both Kassina Girard, 1853 and Afrixalus Laurent, 1944, and its taxonomic status has been debated for decades. It has previously been subsumed within Kassina, and is currently placed as a sister genus to Afrixalus, although it has not been included in any phylogenetic studies until now. This species is poorly represented in museum collections and is only known from fewer than 35 specimens from southern Democratic Republic of the Congo and adjacent Zambia. Newly collected material from central Angola, a range extension of 400-800 km west of previously known localities, allowed us to revisit the taxonomic placement of the genus with the aid of phylogenetic analysis and shed light on its geographic distribution, morphology and natural history. Although our phylogenetic analysis is limited to a single mitochondrial gene (16S), we place Kassinula in the subfamily Hyperoliinae and closely related to Afrixalus, with a high degree of confidence. Further phylogenetic studies are needed before formally synonymising Afrixalus with Kassinula.
- Full Text:
- Date Issued: 2020
- Authors: Conradie, Werner C , Keates, Chad , Lobón-Rovira, Javier , Vaz Pinto, Pedro , Verburgt, Luke , Baptista, Ninda L , Harvey, James , Júlio, Timóteo
- Date: 2020
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/443572 , vital:74134 , https://hdl.handle.net/10520/ejc-afzoo-v55-n4-a6
- Description: Kassinula is a monotypic genus of small frog in the family Hyperoliidae, only represented by Kassinula wittei. This species morphologically resembles both Kassina Girard, 1853 and Afrixalus Laurent, 1944, and its taxonomic status has been debated for decades. It has previously been subsumed within Kassina, and is currently placed as a sister genus to Afrixalus, although it has not been included in any phylogenetic studies until now. This species is poorly represented in museum collections and is only known from fewer than 35 specimens from southern Democratic Republic of the Congo and adjacent Zambia. Newly collected material from central Angola, a range extension of 400-800 km west of previously known localities, allowed us to revisit the taxonomic placement of the genus with the aid of phylogenetic analysis and shed light on its geographic distribution, morphology and natural history. Although our phylogenetic analysis is limited to a single mitochondrial gene (16S), we place Kassinula in the subfamily Hyperoliinae and closely related to Afrixalus, with a high degree of confidence. Further phylogenetic studies are needed before formally synonymising Afrixalus with Kassinula.
- Full Text:
- Date Issued: 2020
A snake in the grass: Genetic structuring of the widespread African grass snake (Psammophylax Fitzinger 1843), with the description of a new genus and a new species
- Keates, Chad, Conradie, Werner C, Greenbaum, Eli, Edwards, Shelley
- Authors: Keates, Chad , Conradie, Werner C , Greenbaum, Eli , Edwards, Shelley
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461473 , vital:76205 , xlink:href="https://doi.org/10.1111/jzs.12337"
- Description: Psammophylax (Fitzinger 1843) is a widespread yet poorly studied genus of African grass snakes. A genetic phylogeny of six of the seven species was estimated using multiple phylogenetic and distance‐based methods. To support the genetic analyses, we conducted morphological analyses on the body (traditional morphology) and head (geometric morphometrics) separately. Phylogenetic analyses recovered a similar topology to past studies, but with better resolution and node support. We found substantial genetic structuring within the genus, supported by significantly different head shapes between P. a. acutus and other Psammophylax. Psammophylax a. acutus was recovered as sister to its congeners, and sequence divergence values and morphometrics supported its recognition as a new genus. Increased sampling in East Africa (Tanzania, Kenya, and Ethiopia) revealed that Psammophylax multisquamis is polyphyletic, necessitating the description of a new, morphologically cryptic species from northern Tanzania. The distribution of P. multisquamis sensu stricto is likely restricted to Kenya and Ethiopia. The study has further resolved multiple aspects of Psammophylax systematics, including the taxonomic validity of two central African subspecies, P. variabilis vanoyei (Laurent 1956) and P. tritaeniatus subniger (Laurent 1956). Inclusion of specimens from the more remote parts of Africa, in future analyses, may result in the recovery of additional diversity within Psammophylax.
- Full Text:
- Date Issued: 2019
- Authors: Keates, Chad , Conradie, Werner C , Greenbaum, Eli , Edwards, Shelley
- Date: 2019
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/461473 , vital:76205 , xlink:href="https://doi.org/10.1111/jzs.12337"
- Description: Psammophylax (Fitzinger 1843) is a widespread yet poorly studied genus of African grass snakes. A genetic phylogeny of six of the seven species was estimated using multiple phylogenetic and distance‐based methods. To support the genetic analyses, we conducted morphological analyses on the body (traditional morphology) and head (geometric morphometrics) separately. Phylogenetic analyses recovered a similar topology to past studies, but with better resolution and node support. We found substantial genetic structuring within the genus, supported by significantly different head shapes between P. a. acutus and other Psammophylax. Psammophylax a. acutus was recovered as sister to its congeners, and sequence divergence values and morphometrics supported its recognition as a new genus. Increased sampling in East Africa (Tanzania, Kenya, and Ethiopia) revealed that Psammophylax multisquamis is polyphyletic, necessitating the description of a new, morphologically cryptic species from northern Tanzania. The distribution of P. multisquamis sensu stricto is likely restricted to Kenya and Ethiopia. The study has further resolved multiple aspects of Psammophylax systematics, including the taxonomic validity of two central African subspecies, P. variabilis vanoyei (Laurent 1956) and P. tritaeniatus subniger (Laurent 1956). Inclusion of specimens from the more remote parts of Africa, in future analyses, may result in the recovery of additional diversity within Psammophylax.
- Full Text:
- Date Issued: 2019
Two new species of Acontias (Acontinae, Scincidae) from the Mpumalanga Highveld escarpment of South Africa
- Conradie, Werner C, Busschau, Theo, Edwards, Shelley
- Authors: Conradie, Werner C , Busschau, Theo , Edwards, Shelley
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462735 , vital:76330 , xlink:href="https://europepmc.org/article/med/30313280"
- Description: The African genus of fossorial legless lizards (Acontias Cuvier) currently comprises 26 species and subspecies. In a recent study on the two disjunct populations of Acontias breviceps Essex, the presence of cryptic species was discovered. Here, we increase the sampling size and describe these disjunct populations from the Mpumalanga Escarpment of South Africa as new species. The new species differ from congeners based on a combination of factors, including the number of midbody, ventral, and subcaudal scale counts, ventral pigmentation, allopatric distributions, and genetic divergences. The new species are genetically distant from nominal A. breviceps, with which it shares overall pigmentation and scalation. The new description adds to the growing number of Mpumalanga escarpment endemic reptiles, and highlights the area as a biodiversity hotspot. The use of vertebral counts as a distinguishing character between species is briefly discussed.
- Full Text:
- Date Issued: 2018
- Authors: Conradie, Werner C , Busschau, Theo , Edwards, Shelley
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462735 , vital:76330 , xlink:href="https://europepmc.org/article/med/30313280"
- Description: The African genus of fossorial legless lizards (Acontias Cuvier) currently comprises 26 species and subspecies. In a recent study on the two disjunct populations of Acontias breviceps Essex, the presence of cryptic species was discovered. Here, we increase the sampling size and describe these disjunct populations from the Mpumalanga Escarpment of South Africa as new species. The new species differ from congeners based on a combination of factors, including the number of midbody, ventral, and subcaudal scale counts, ventral pigmentation, allopatric distributions, and genetic divergences. The new species are genetically distant from nominal A. breviceps, with which it shares overall pigmentation and scalation. The new description adds to the growing number of Mpumalanga escarpment endemic reptiles, and highlights the area as a biodiversity hotspot. The use of vertebral counts as a distinguishing character between species is briefly discussed.
- Full Text:
- Date Issued: 2018
- «
- ‹
- 1
- ›
- »